It works best to do the preparations - parasite cleanse and a method of dissolving or softening stones - before doing a Liver Flush but Hulda Clark wrote that if you are having serious problems with bile congestion do the Liver-Flush as soon as possible and then do the preparations.
Has your Dr. tested you for Celiac Disease (one of the gluten sensitivities)? In some people the genes that predispose to developing Type 1 Diabetes also predisposes to the development of CD. This happened in my family, a brother has Type 1 Diabetes and I developed CD. Some people develop both autoimmune problems. See Celiac.com information pages for symptoms and tests.